01Active research
RNA structure
tpFormer
Topology-aware RNA structure modeling that brings sequence, contacts, and evolutionary information into iterative refinement.
Projects
Three perspectives on RNA.
Structure prediction, sequence design, and structural evaluation form complementary parts of my research.
02Public software
RNA 3D design
DS3dRNA
De novo sequence design for target RNA 3D structures, using structural constraints and higher-order interactions.
03Published work
RNA structure evaluation
TriRNASP
RNA structural scoring with a knowledge-based potential that incorporates three-body structural information.
One domain. A broader research programme.
The name tpformer.com comes from tpFormer. This website also brings together research in RNA design, statistical potentials, and computational biophysics.
Research themes →